import os from galaxy_test.base.populators import DatasetPopulator from galaxy_test.driver import integration_util SCRIPT_DIRECTORY = os.path.abspath(os.path.dirname(__file__)) MOCK_BIOTOOLS_CONTENT = os.path.join(SCRIPT_DIRECTORY, "mock_biotools_content") class TestDynamicEdamLoadingIntegration(integration_util.IntegrationTestCase): """Test mapping over tools with extended metadata enabled.""" framework_tool_and_types = True @classmethod def handle_galaxy_config_kwds(cls, config): super().handle_galaxy_config_kwds(config) config["biotools_content_directory"] = MOCK_BIOTOOLS_CONTENT config["biotools_use_api"] = False def setUp(self): super().setUp() self.dataset_populator = DatasetPopulator(self.galaxy_interactor) def test_edam_properties(self): result = self._get("tools/bibtex") result.raise_for_status() result_json = result.json() assert "edam_operations" in result_json assert "edam_topics" in result_json edam_operations = result_json["edam_operations"] edam_topics = result_json["edam_topics"] assert len(edam_operations) == 4 assert "operation_3198" in edam_operations assert len(edam_topics) == 1 assert "topic_0102" in edam_topics