import os import sys import time import glob import random import datetime import numpy as np from time import time import SimpleITK as sitk def load_single_data(data_path,aux_task=False,margin_size=32): ''' Load data denotes by path in data_paths and concatenate them together ''' print(data_path) if len(data_path.split('/')[-1].split('.')[0].split('_')) == 3: mode_1, mode_2,_ = data_path.split('/')[-1].split('.')[0].split('_') else: mode_1, mode_2 = data_path.split('/')[-1].split('.')[0].split('_') if mode_2 == 'info': data = np.load(data_path, allow_pickle=True) else: data = np.load(data_path) print ('{}_{} shape is {}'.format(mode_1, mode_2, data.shape)) # if len(temp_data.shape)==2 and (not aux_task): # temp_data = temp_data # elif len(temp_data.shape)==4: # center = int(temp_data.shape[1]/2) # margin_size = margin_size # temp_data = temp_data[:,center-margin_size:center+margin_size, # center-margin_size:center+margin_size, # center-margin_size:center+margin_size] return data def load_data(paths_list,aux_task=False,margin_size=32): result_list = [load_single_data(data_paths,aux_task=aux_task,margin_size=margin_size) for data_paths in paths_list] return result_list